diff imagej2_create_image_jython_script.py @ 0:191d574ddd8d draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/image_processing/imagej2 commit b'7e5cd452018ae9507c2d1cd13dd688a747550393\n'
author bgruening
date Sat, 18 Mar 2017 09:43:20 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/imagej2_create_image_jython_script.py	Sat Mar 18 09:43:20 2017 -0400
@@ -0,0 +1,14 @@
+import sys
+from ij import IJ
+
+# Fiji Jython interpreter implements Python 2.5 which does not
+# provide support for argparse.
+title = sys.argv[ -6 ]
+width = int( sys.argv[ -5 ] )
+height = int( sys.argv[ -4 ] )
+depth = int( sys.argv[ -3 ] )
+type = sys.argv[ -2 ].replace( '_', ' ' )
+tmp_image_path = sys.argv[ -1 ]
+
+imp = IJ.newImage( title, type, width, height, depth )
+IJ.save( imp, "%s" % tmp_image_path )