Mercurial > repos > bgruening > homer_annotation_suite

changeset 1:aa532cb996ed draft default tip

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Uploaded
author bgruening
date Fri, 21 Mar 2014 08:25:34 -0400
parents 7b40ed8d2a18
children
files tool_dependencies.xml tools/homer_macros.xml
diffstat 2 files changed, 3 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Fri Mar 21 08:15:22 2014 -0400
+++ b/tool_dependencies.xml	Fri Mar 21 08:25:34 2014 -0400
@@ -4,6 +4,6 @@
         <repository changeset_revision="c0f72bdba484" name="package_samtools_0_1_18" owner="devteam" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="homer" version="4.2">
-        <repository changeset_revision="f59c0d41c9d9" name="package_homer_4_2" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="e38be1da9ed3" name="package_homer_4_2" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>
--- a/tools/homer_macros.xml	Fri Mar 21 08:15:22 2014 -0400
+++ b/tools/homer_macros.xml	Fri Mar 21 08:25:34 2014 -0400
@@ -10,10 +10,8 @@
     </xml>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="35x1">blat</requirement>
-            <requirement type="package" version="2.8.2">weblogo</requirement>
-            <requirement type="package" version="9.07">ghostscript</requirement>
-            <requirement type="package" version="5.18.1">perl</requirement>
+            <requirement type="package" version="0.1.18">samtools</requirement>
+            <requirement type="package" version="4.2">homer</requirement>
         </requirements>
     </xml>
 </macros>