# HG changeset patch # User bgruening # Date 1503142565 14400 # Node ID 1fdbfe49ee3657f334b7fc2a1a6ddd6260f8e939 # Parent 57562805db8a5008edefd80b73b399f1aa77b0a6 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b4d9ad47b45abb117a059214e1f7b29d084b4ca3 diff -r 57562805db8a -r 1fdbfe49ee36 hicup_macros.xml --- a/hicup_macros.xml Thu Mar 09 09:29:49 2017 -0500 +++ b/hicup_macros.xml Sat Aug 19 07:36:05 2017 -0400 @@ -75,7 +75,7 @@ <param argument="--re2" type="text" value="" label="Restriction enzyme instead of sonication to shorten di-tags." help="To specify a restriction enzyme instead of sonication to shorten di-tags. This restriction site does NOT form a Hi-C ligation junction. 2 .g. AG^CT,AluI. Typically the sonication protocol is followed."/> </xml> <xml name="digester_input"> - <param name="input_files_digest" type="data" multiple="true" format="fa" label="Input DNA sequence files that should be digested"/> + <param name="input_files_digest" type="data" multiple="true" format="fasta" label="Input DNA sequence files that should be digested"/> <param argument="--genome" type="text" label="Genome" help="Name of the genome to be digested (not the path to the genome file or files, but the genome name to include in the output file)"/> </xml> @@ -91,4 +91,4 @@ <data name="uniques_barchart" format="svg" from_work_dir="deduplicator_uniques_barchart.svg" label="Hicup Deduplicator Uniques Barchart.svg" /> <data name="hicup_deduplicator_summary" format="txt" from_work_dir="hicup_deduplicator_summary.txt" label="Hicup Deduplicator Summary" /> </xml> -</macros> \ No newline at end of file +</macros>