Truncating and Mapping
| |
Read 1 |
Read 2 |
| Total Reads |
99742 |
99742 |
| Not Truncated |
92512 |
92628 |
| Truncated |
7230 |
7114 |
| Too short to map |
2658 |
2476 |
| Average length of truncated sequence |
22.45 |
22.63 |
| |
Read 1 |
Read 2 |
| Unique Alignments |
3885 |
3725 |
| Multiple Alignments |
12437 |
12679 |
| Failed To Align |
80762 |
80862 |
| Paired |
1143 |
1143 |
Filtering
| |
Di-Tag Count |
| Valid Pairs |
543 |
| Invalid Pairs |
600 |
| Same Circularised |
22 |
| Same Fragment Dangling Ends |
75 |
| Same Fragment Internal |
474 |
| Re-ligation |
29 |
| Contiguous Sequence |
0 |
| Wrong Size |
0 |
| Total Pairs |
1143 |
Di-tag length Distribution
De-duplication
Percentage uniques: 100.00
| |
All Di-Tags |
Unique Di-Tags |
| Read Pairs |
543 |
543 |
| Cis-close (< 10Kbp) |
43 |
43 |
| Cis-far (> 10Kbp) |
440 |
440 |
| Trans |
60 |
60 |
