# HG changeset patch
# User iuc
# Date 1524832196 14400
# Node ID b6fbf07de5aff651cd2a0032487c6073b1d7ae53
# Parent  60a37b9104677566bc1aac834b103a4a7cc85859
planemo upload for repository https://github.com/maxplanck-ie/HiCExplorer/tree/master/galaxy/wrapper/ commit dddc0b9035b8edadfd45d74b01aeca245c2725d7

diff -r 60a37b910467 -r b6fbf07de5af hicPlotDistVsCounts.xml
--- a/hicPlotDistVsCounts.xml	Fri Apr 27 05:50:55 2018 -0400
+++ b/hicPlotDistVsCounts.xml	Fri Apr 27 08:29:56 2018 -0400
@@ -102,14 +102,15 @@
 Below can be found an example output:
 
 .. image:: $PATH_TO_IMAGES/hicPlotDistVsCounts.png
-   :width: 65%
+   :scale: 50 %
 
 Here, we see that the samples from the first condition are not so well correlated, but they follow the same tendancies and are distinct from the two samples of the second condition. The later are well correlated and display enriched long-range contacts compared to the first condition samples.
 
+
 On the second graph below, the distance vs. Hi-C contact counts is computed and plotted per chromosome:
 
 .. image:: $PATH_TO_IMAGES/hicPlotDistVsCounts_result2.png
-   :width: 80%
+   :scale: 50 %
 
 _________________
 
diff -r 60a37b910467 -r b6fbf07de5af static/images/hicCompareMatrices_QC_log2_m50_matrix_plot (1).png
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diff -r 60a37b910467 -r b6fbf07de5af static/images/hicCompareMatrices_QC_log2_m50_matrix_plot.png
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diff -r 60a37b910467 -r b6fbf07de5af static/images/hicCompareMatrices_m1bp_over_gst_log2_m50_matrix_plot (1).png
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diff -r 60a37b910467 -r b6fbf07de5af static/images/hicCompareMatrices_m1bp_over_gst_log2_m50_matrix_plot.png
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diff -r 60a37b910467 -r b6fbf07de5af static/images/hicPlotDistVsCounts.png
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diff -r 60a37b910467 -r b6fbf07de5af static/images/hicPlotDistvsCounts.png
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