# HG changeset patch
# User iuc
# Date 1528571093 14400
# Node ID 8a357763c4a88584089602364fb4ded8db4d3082
# Parent b1ebaa4b98a958f8c577958cccbe6806fcacaa41
planemo upload for repository https://github.com/maxplanck-ie/HiCExplorer/tree/master/galaxy/wrapper/ commit 2307743fd10f0babde52eec30289fe1682236287
diff -r b1ebaa4b98a9 -r 8a357763c4a8 hicPCA.xml
--- a/hicPCA.xml Fri Apr 27 08:34:37 2018 -0400
+++ b/hicPCA.xml Sat Jun 09 15:04:53 2018 -0400
@@ -90,7 +90,7 @@
| For more information about HiCExplorer please consider our documentation on readthedocs.io_
.. _readthedocs.io: http://hicexplorer.readthedocs.io/en/latest/index.html
-.. _`Lieberman-Aiden et al. (2009)`: https://dx.doi.org/10.1126%2Fscience.1181369
+.. _`Lieberman-Aiden et al. (2009)`: https://doi.org/10.1126%2Fscience.1181369
]]>
diff -r b1ebaa4b98a9 -r 8a357763c4a8 macros.xml
--- a/macros.xml Fri Apr 27 08:34:37 2018 -0400
+++ b/macros.xml Sat Jun 09 15:04:53 2018 -0400
@@ -1,6 +1,6 @@
\${GALAXY_SLOTS:-4}
- 2.1.2
+ 2.1.4
#if $use_range.select_use_range == "yes_use_range":
--range $range_min:$range_max
diff -r b1ebaa4b98a9 -r 8a357763c4a8 test-data/Li_chrX30-35_cool.png
Binary file test-data/Li_chrX30-35_cool.png has changed
diff -r b1ebaa4b98a9 -r 8a357763c4a8 test-data/Li_et_al_2015.cool
Binary file test-data/Li_et_al_2015.cool has changed
diff -r b1ebaa4b98a9 -r 8a357763c4a8 test-data/distVsCounts.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/distVsCounts.txt Sat Jun 09 15:04:53 2018 -0400
@@ -0,0 +1,62 @@
+ Chromosome Contacts Distance Matrix
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+1 all 1.6689429928741093 50000 small_test_matrix_50kb_res.h5
+2 all 0.7796660703637448 100000 small_test_matrix_50kb_res.h5
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+8 all 0.12736713500305435 400000 small_test_matrix_50kb_res.h5
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