# HG changeset patch
# User bgruening
# Date 1370605909 14400
# Node ID 2d0c268856040cc2ca727ced0f03c196b55f2c45
# Parent  a6582d591d64c808ef37325e5a9910521cefc287
Uploaded

diff -r a6582d591d64 -r 2d0c26885604 glimmer3-main-wrapper.xml
--- a/glimmer3-main-wrapper.xml	Fri Jun 07 07:45:02 2013 -0400
+++ b/glimmer3-main-wrapper.xml	Fri Jun 07 07:51:49 2013 -0400
@@ -14,7 +14,7 @@
         --max_olap $max_olap
         --gene_len $gene_len
         --threshold $threshold
-        #if float( $gc_percent ) > 0.0:
+        #if float( str($gc_percent) ) > 0.0:
             --gc_percent $gc_percent
         #end if
 
diff -r a6582d591d64 -r 2d0c26885604 glimmer_predict.xml
--- a/glimmer_predict.xml	Fri Jun 07 07:45:02 2013 -0400
+++ b/glimmer_predict.xml	Fri Jun 07 07:51:49 2013 -0400
@@ -25,7 +25,9 @@
         <param name="gene_length" type="integer" value="110" label="Set minimum gene length." />
         <param name="threshold" type="integer" value="30" label="Set threshold score for calling as gene. If the in-frame score >= N, then the region is given a number and considered a potential gene." />
         <param name="linear" type="boolean" truevalue="true" falsevalue="false" checked="true" label="Assume linear rather than circular genome, i.e., no wraparound" />
-        <param name="detailed_report" type="boolean" truevalue="" falsevalue="" checked="false" label="Output a detailed gene prediction report as separate file"/>
+
+        <param name="detailed_report" type="boolean" truevalue="" falsevalue="" checked="false" label="Output a detailed gene prediction report as separate file" />
+        <param name="report" type="boolean" truevalue="" falsevalue="" checked="false" label="Report the classic glimmer table output" />
     </inputs>
     <outputs>
         <data name="genes_output" format="fasta" label="Glimmer3 on ${on_string} (Gene Prediction FASTA)" />