Mercurial > repos > bgruening > erga_ear

diff test-data/genomescope_results_summary.txt @ 0:6af76d4371f8 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ERGA-consortium/EARs/tree/main commit a08f73e00550020ac83f4d45045075962a8a2251
author bgruening
date Thu, 04 Jul 2024 12:43:34 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/genomescope_results_summary.txt	Thu Jul 04 12:43:34 2024 +0000
@@ -0,0 +1,15 @@
+GenomeScope version 2.0
+input file = /scratch/ddepanis/Elephant_project/mEleMax1.2/curated/1_evaluation/kmer_profiling/HiFi_trimmed.meryl/merylDB_10000.hist
+output directory = /scratch/ddepanis/Elephant_project/mEleMax1.2/curated/1_evaluation/kmer_profiling/HiFi_trimmed.meryl/genomescope/
+p = 2
+k = 31
+name prefix = results
+
+property                      min               max               
+Homozygous (aa)               99.739%           99.7476%          
+Heterozygous (ab)             0.252443%         0.260993%         
+Genome Haploid Length         3,011,504,214 bp  3,013,249,396 bp  
+Genome Repeat Length          551,610,389 bp    551,930,050 bp    
+Genome Unique Length          2,459,893,825 bp  2,461,319,346 bp  
+Model Fit                     83.6025%          98.1859%          
+Read Error Rate               0.16852%          0.16852%