changeset 5:0c322f7afd31 draft

Uploaded
author bgruening
date Tue, 14 Jan 2014 03:32:06 -0500
parents aad86ce28779
children da65ae70e2e1
files tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Jan 13 18:14:30 2014 -0500
+++ b/tool_dependencies.xml	Tue Jan 14 03:32:06 2014 -0500
@@ -7,15 +7,13 @@
         <repository changeset_revision="3b6a8c377895" name="package_deseq2_1_0_17" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
     </package>
 
-    <package name="diffbind" version="2.13">
+    <package name="diffbind" version="1.8.3">
         <install version="1.0">
             <actions>
                 <action type="setup_r_environment">
-
                     <repository changeset_revision="0a395bcd7efd" name="package_r_3_0_1" owner="iuc" toolshed="http://testtoolshed.g2.bx.psu.edu">
                         <package name="R_3_0_1" version="3.0.1" />
                     </repository>
-
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BiocGenerics_0.8.0.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/XVector_0.2.0.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/limma_3.18.9.tar.gz</package>
@@ -37,7 +35,7 @@
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/BSgenome_1.30.0.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/RCurl_1.95-4.1.tar.gz</package>
                         <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/rtracklayer_1.22.0.tar.gz</package>
-
+                        <package>https://github.com/bgruening/download_store/raw/master/DiffBind-1_8_3/getopt_1.20.0.tar.gz</package>
                 </action>
             </actions>
         </install>