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comparison diffbind.xml @ 4:aad86ce28779 draft

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Uploaded
author bgruening
date Mon, 13 Jan 2014 18:14:30 -0500
parents 4f2b7248886c
children da65ae70e2e1
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3:4f2b7248886c 4:aad86ce28779
35 <param name="factor" type="text" value="Factor Name" label="Specify a factor name" help="e.g. ER" /> 35 <param name="factor" type="text" value="Factor Name" label="Specify a factor name" help="e.g. ER" />
36 <param name="condition" type="text" value="Condition" label="Specify the condition" help="e.g. Resistent" /> 36 <param name="condition" type="text" value="Condition" label="Specify the condition" help="e.g. Resistent" />
37 <param name="replicate" type="integer" value="1" label="Specify the replicate number" help="e.g. 1" /> 37 <param name="replicate" type="integer" value="1" label="Specify the replicate number" help="e.g. 1" />
38 <param format="bam" name="bamreads" type="data" label="Read BAM file" help="Specify the Read BAM file, used for Peak calling."/> 38 <param format="bam" name="bamreads" type="data" label="Read BAM file" help="Specify the Read BAM file, used for Peak calling."/>
39 <param format="bam" name="bamcontrol" type="data" label="Control BAM file" help="Specify the Control BAM file, used for Peak calling."/> 39 <param format="bam" name="bamcontrol" type="data" label="Control BAM file" help="Specify the Control BAM file, used for Peak calling."/>
40 <param format="bam" name="bamreads" type="data" label="Peak file" help="Result of your Peak calling experiment."/> 40 <param format="bed" name="peaks" type="data" label="Peak file" help="Result of your Peak calling experiment."/>
41 </repeat> 41 </repeat>
42 <param name="pdf" type="boolean" truevalue="" falsevalue="" checked="true" 42 <param name="pdf" type="boolean" truevalue="" falsevalue="" checked="true"
43 label="Visualising the analysis results" 43 label="Visualising the analysis results"
44 help="output an additional PDF files" /> 44 help="output an additional PDF files" />
45 <param name="format" type="select" label="Output Format"> 45 <param name="format" type="select" label="Output Format">