Mercurial > repos > bgruening > diffbind
comparison diffbind.R @ 11:a8dc71379df0 draft
Uploaded
| author | bgruening |
|---|---|
| date | Fri, 17 Jan 2014 04:04:16 -0500 |
| parents | b1b96b6ed60c |
| children | 11cd8b1ae397 |
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| 10:b1b96b6ed60c | 11:a8dc71379df0 |
|---|---|
| 25 if ( !is.null(opt$help) ) { | 25 if ( !is.null(opt$help) ) { |
| 26 cat(getopt(spec, usage=TRUE)); | 26 cat(getopt(spec, usage=TRUE)); |
| 27 q(status=1); | 27 q(status=1); |
| 28 } | 28 } |
| 29 | 29 |
| 30 | |
| 31 library('DiffBind') | 30 library('DiffBind') |
| 32 # used to save to BED, GFF or WIG format | |
| 33 | 31 |
| 34 if ( !is.null(opt$plots) ) { | 32 if ( !is.null(opt$plots) ) { |
| 35 pdf(opt$plots) | 33 pdf(opt$plots) |
| 36 } | 34 } |
| 37 | 35 |
