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comparison diffbind.xml @ 14:4de6355eca00 draft

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Uploaded
author bgruening
date Sat, 15 Mar 2014 05:21:59 -0400
parents 43884541e66f
children aefe2a771a95
comparison
equal deleted inserted replaced
13:42d23a280d80 14:4de6355eca00
1 <tool id="diffbind" name="DiffBind" version="2.0.1"> 1 <tool id="diffbind" name="DiffBind" version="2.0.2">
2 <description> differential binding analysis of ChIP-Seq peak data</description> 2 <description> differential binding analysis of ChIP-Seq peak data</description>
3 <requirements> 3 <requirements>
4 <requirement type="binary">Rscript</requirement> 4 <requirement type="binary">Rscript</requirement>
5 <requirement type="R-module">DESeq2</requirement> 5 <requirement type="R-module">DESeq2</requirement>
6 <requirement type="package" version="3.0.1">R_3_0_1</requirement> 6 <requirement type="package" version="3.0.3">R</requirement>
7 <requirement type="package" version="1.0.17">deseq2</requirement> 7 <requirement type="package" version="1.2.10">deseq2</requirement>
8 <requirement type="package" version="1.8.3">diffbind</requirement> 8 <requirement type="package" version="1.8.3">diffbind</requirement>
9 <requirement type="set_environment">DIFFBIND_SCRIPT_PATH</requirement> 9 <requirement type="set_environment">DIFFBIND_SCRIPT_PATH</requirement>
10 </requirements> 10 </requirements>
11 <command> 11 <command>
12 ## seems that diffbind also needs file extensions to work properly 12 ## seems that diffbind also needs file extensions to work properly