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comparison diffbind.xml @ 2:0c7207440cf0 draft

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author bgruening
date Mon, 13 Jan 2014 18:03:57 -0500
parents 0753d019a353
children 4f2b7248886c
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1:0753d019a353 2:0c7207440cf0
32 <repeat name="samples" title="Samples" min="2"> 32 <repeat name="samples" title="Samples" min="2">
33 <param name="sample_id" type="text" value="Sample ID" label="Specify a sample id" help="e.g. BT474.1-" /> 33 <param name="sample_id" type="text" value="Sample ID" label="Specify a sample id" help="e.g. BT474.1-" />
34 <param name="tissue" type="text" value="Tissue" label="Specify the tissue" help="e.g. BT474" /> 34 <param name="tissue" type="text" value="Tissue" label="Specify the tissue" help="e.g. BT474" />
35 <param name="factor" type="text" value="Factor Name" label="Specify a factor name" help="e.g. ER" /> 35 <param name="factor" type="text" value="Factor Name" label="Specify a factor name" help="e.g. ER" />
36 <param name="condition" type="text" value="Condition" label="Specify the condition" help="e.g. Resistent" /> 36 <param name="condition" type="text" value="Condition" label="Specify the condition" help="e.g. Resistent" />
37 <param name="replicate" type="int" value="Replicate" label="Specify the replicate number" help="e.g. 1" /> 37 <param name="replicate" type="integer" value="Replicate" label="Specify the replicate number" help="e.g. 1" />
38 <param format="bam" name="bamreads" type="data" label="Read BAM file" help="Specify the Read BAM file, used for Peak calling."/> 38 <param format="bam" name="bamreads" type="data" label="Read BAM file" help="Specify the Read BAM file, used for Peak calling."/>
39 <param format="bam" name="bamcontrol" type="data" label="Control BAM file" help="Specify the Control BAM file, used for Peak calling."/> 39 <param format="bam" name="bamcontrol" type="data" label="Control BAM file" help="Specify the Control BAM file, used for Peak calling."/>
40 <param format="bam" name="bamreads" type="data" label="Peak file" help="Result of your Peak calling experiment."/> 40 <param format="bam" name="bamreads" type="data" label="Peak file" help="Result of your Peak calling experiment."/>
41 </repeat> 41 </repeat>
42 <param name="pdf" type="boolean" truevalue="" falsevalue="" checked="true" 42 <param name="pdf" type="boolean" truevalue="" falsevalue="" checked="true"