# HG changeset patch
# User bgruening
# Date 1423304628 18000
# Node ID ee4371aa0666154291cbfcae0d72b83e9d187e6d
Uploaded
diff -r 000000000000 -r ee4371aa0666 diamand.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/diamand.xml Sat Feb 07 05:23:48 2015 -0500
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+ alignment tool for short sequences against a protein database
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+ diamond
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+ 10.1038/nmeth.3176
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diff -r 000000000000 -r ee4371aa0666 diamand_makedb.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/diamand_makedb.xml Sat Feb 07 05:23:48 2015 -0500
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+ Build database from a FASTA file
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+ diamond
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+ 10.1038/nmeth.3176
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diff -r 000000000000 -r ee4371aa0666 test-data/diamond_result1.tabular
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/diamond_result1.tabular Sat Feb 07 05:23:48 2015 -0500
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+gi|5524211|gb|AAD44166.1| gi|5524211|gb|AAD44166.1| 90.85 284 26 0 1 284 1 284 7e-155 528.5
diff -r 000000000000 -r ee4371aa0666 test-data/protein.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/protein.fasta Sat Feb 07 05:23:48 2015 -0500
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+>gi|5524211|gb|AAD44166.1| cytochrome b [Elephas maximus maximus]
+LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLV
+EWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLG
+LLILILLLLLLALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVIL
+GLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGX
+IENY
diff -r 000000000000 -r ee4371aa0666 tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Sat Feb 07 05:23:48 2015 -0500
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