# HG changeset patch
# User bgruening
# Date 1423398592 18000
# Node ID 89f59d6c334426367c4c5ee6616632baf4e10ead
# Parent  9a5e0e2c07135465278fee47b2d3f4c72d16c0b2
Uploaded

diff -r 9a5e0e2c0713 -r 89f59d6c3344 tool-data/diamond_database.loc.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/diamond_database.loc.sample	Sun Feb 08 07:29:52 2015 -0500
@@ -0,0 +1,10 @@
+#This is a sample file that enables the diamind to find the protein databases
+#You will need to create these data files and then create 
+#a diamond_database.loc file similar to this one (store it in this directory) 
+#that points to the directories in which those files are stored. 
+#The diamond_database_indices.loc file has this format (longer white space characters are TAB characters):
+#
+#<unique_build_id>   <display_name>   <file_base_path>
+#
+#So, for example:
+#ncbi_nr	NCBI NR database (1-1-2015)	/data/db/diamond/1-1-2015/nr.dmnd
diff -r 9a5e0e2c0713 -r 89f59d6c3344 tool_data_table_conf.xml.sample
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_data_table_conf.xml.sample	Sun Feb 08 07:29:52 2015 -0500
@@ -0,0 +1,8 @@
+<!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
+<tables>
+    <!-- Locations of indexes in the Bowtie mapper format -->
+    <table name="diamond_database" comment_char="#">
+        <columns>value, name, db_path</columns>
+        <file path="tool-data/diamond_database.loc" />
+    </table>
+</tables>