# HG changeset patch
# User bgruening
# Date 1378368562 14400
# Node ID ff74cd9b041405fc4925cf2690ef676b13d7723d
# Parent  bb5c80d15e0a68b80dd72955b5fb94d4f40f4210
Uploaded

diff -r bb5c80d15e0a -r ff74cd9b0414 deseq2.xml
--- a/deseq2.xml	Wed Sep 04 11:58:20 2013 -0400
+++ b/deseq2.xml	Thu Sep 05 04:09:22 2013 -0400
@@ -1,4 +1,4 @@
-<tool id="deseq2" name="DESeq2" version="2.0">
+<tool id="deseq2" name="DESeq2" version="2.0.1">
   <description>Determines differentially expressed transcripts from read alignments</description>
     <requirements>
         <requirement type="binary">Rscript</requirement>
@@ -39,11 +39,15 @@
         <regex match="Execution halted" 
            source="both" 
            level="fatal" 
-           description="Execution halted" />
+           description="Execution halted." />
         <regex match="Input-Error 01" 
            source="both" 
            level="fatal" 
            description="Error in your input parameters: Make sure you only apply factors to selected samples." />
+        <regex match="Error in" 
+           source="both" 
+           level="fatal" 
+           description="An undefined error occured, please check your intput carefully and contact your administrator." />
     </stdio>
     <inputs>
         <param format="tabular" name="input_matrix" type="data" label="Countmatrix" help="You can create a count matrix with the tool ..."/>