# HG changeset patch # User bgruening # Date 1520020164 18000 # Node ID 8be53e83a2af65b07b9e73e4bb0b5fd42ced4f80 # Parent 3ae26ce6716d813428623d684e5472d8791732ab planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 72ae8f62333aa38d1c63034ddb37184a0f72c64e-dirty diff -r 3ae26ce6716d -r 8be53e83a2af deepTools_macros.xml --- a/deepTools_macros.xml Thu Feb 15 04:11:12 2018 -0500 +++ b/deepTools_macros.xml Fri Mar 02 14:49:24 2018 -0500 @@ -1,10 +1,10 @@ --numberOfProcessors "\${GALAXY_SLOTS:-4}" - 3.0.0 + 3.0.1 - deeptools + deeptools samtools @@ -456,7 +456,6 @@ #for $counter, $f in enumerate($multibam_conditional.multibam_repeats): #set identifier = re.sub('[^\.\s\w\-]', '_', str($f.bamfiles.element_identifier)) ln -s "${f.bamfiles}" "./${counter}.bam" && - ln -s "${f.bamfiles.metadata.bam_index}" "./${counter}.bam.bai" && #if $f.bamfiles.ext == 'bam': ln -s '${f.bamfiles.metadata.bam_index}' './${counter}.bam.bai' && #else: diff -r 3ae26ce6716d -r 8be53e83a2af plotProfiler.xml --- a/plotProfiler.xml Thu Feb 15 04:11:12 2018 -0500 +++ b/plotProfiler.xml Fri Mar 02 14:49:24 2018 -0500 @@ -59,10 +59,10 @@ $advancedOpt.perGroup - #if $advancedOpt.yMin: + #if str($advancedOpt.yMin): --yMin $advancedOpt.yMin #end if - #if $advancedOpt.yMax: + #if str($advancedOpt.yMax): --yMax $advancedOpt.yMax #end if