Mercurial > repos > bgruening > deeptools_plot_pca
comparison plotPCA.xml @ 41:9e2dc0d5082a draft default tip
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 810c1359b884661d3f5c7372be0f0f88c859a3b9
author | bgruening |
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date | Thu, 01 Jun 2023 10:06:06 +0000 |
parents | e074335bde9c |
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40:6f2e93384b40 | 41:9e2dc0d5082a |
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1 <tool id="deeptools_plot_pca" name="plotPCA" version="@WRAPPER_VERSION@.0" profile="18.01"> | 1 <tool id="deeptools_plot_pca" name="plotPCA" version="@TOOL_VERSION@+galaxy0" profile="@GALAXY_VERSION@"> |
2 <description>Generate principal component analysis (PCA) plots from multiBamSummary or multiBigwigSummary output</description> | 2 <description>Generate principal component analysis (PCA) plots from multiBamSummary or multiBigwigSummary output</description> |
3 <macros> | 3 <macros> |
4 <token name="@BINARY@">plotPCA</token> | 4 <token name="@BINARY@">plotPCA</token> |
5 <import>deepTools_macros.xml</import> | 5 <import>deepTools_macros.xml</import> |
6 </macros> | 6 </macros> |
76 <param name="corData" value="multiBamSummary_result2b.npz" ftype="deeptools_coverage_matrix" /> | 76 <param name="corData" value="multiBamSummary_result2b.npz" ftype="deeptools_coverage_matrix" /> |
77 <param name="plotTitle" value="Test Plot" /> | 77 <param name="plotTitle" value="Test Plot" /> |
78 <param name="outFileFormat" value="png" /> | 78 <param name="outFileFormat" value="png" /> |
79 <param name="outFileNameData" value="True" /> | 79 <param name="outFileNameData" value="True" /> |
80 <output name="outFileName" file="plotPCA_result2.png" ftype="png" compare="sim_size" delta="12000" /> | 80 <output name="outFileName" file="plotPCA_result2.png" ftype="png" compare="sim_size" delta="12000" /> |
81 <output name="output_outFileNameData" file="plotPCA_result2.tabular" ftype="tabular" /> | 81 <output name="output_outFileNameData" file="plotPCA_result2.tabular" ftype="tabular" lines_diff="2" /> |
82 </test> | 82 </test> |
83 </tests> | 83 </tests> |
84 <help> | 84 <help> |
85 <![CDATA[ | 85 <![CDATA[ |
86 | 86 |