Mercurial > repos > bgruening > deeptools_plot_fingerprint
comparison plotFingerprint.xml @ 26:71b17039e0de draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 5a01e3a370130f32a82d5436504371ed95be1754
| author | bgruening |
|---|---|
| date | Thu, 05 Apr 2018 10:46:58 -0400 |
| parents | 49bf0a3db1d7 |
| children | 61f024fc41d1 |
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| 25:596f10fa189f | 26:71b17039e0de |
|---|---|
| 22 #if $output.saveQualityMetrics: | 22 #if $output.saveQualityMetrics: |
| 23 --outQualityMetrics '$outFileQualityMetrics' | 23 --outQualityMetrics '$outFileQualityMetrics' |
| 24 #if $output.JSDsample: | 24 #if $output.JSDsample: |
| 25 #if "'{}'".format($output.JSDsample.display_name) in $labels: | 25 #if "'{}'".format($output.JSDsample.display_name) in $labels: |
| 26 #set JSDidx = $labels.index("'{}'".format($output.JSDsample.display_name)) | 26 #set JSDidx = $labels.index("'{}'".format($output.JSDsample.display_name)) |
| 27 --JSDsample "${JSDidx}.bam" | 27 --JSDsample '${JSDidx}.bam' |
| 28 #end if | 28 #end if |
| 29 #end if | 29 #end if |
| 30 #end if | 30 #end if |
| 31 #else | 31 #else |
| 32 --plotFileFormat 'png' | 32 --plotFileFormat 'png' |