Mercurial > repos > bgruening > deeptools_compute_gc_bias
changeset 38:257f7455458e draft
planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 3cefc7d64faa53ef9a4e5984c7b275fc47cbdaaf
| author | bgruening |
|---|---|
| date | Wed, 20 Feb 2019 09:23:59 -0500 |
| parents | 0dae3a3f2b96 |
| children | 9fc14ae5cb8d |
| files | deepTools_macros.xml test-data/estimateReadFiltering.txt |
| diffstat | 2 files changed, 4 insertions(+), 4 deletions(-) [+] |
line wrap: on
line diff
--- a/deepTools_macros.xml Tue Feb 19 10:31:31 2019 -0500 +++ b/deepTools_macros.xml Wed Feb 20 09:23:59 2019 -0500 @@ -512,7 +512,7 @@ <token name="@multiple_input_bigwigs@"> <![CDATA[ - #if $custom_labels_conditional.custom_labels_select == "Yes": + #if $custom_sample_labels_conditional.custom_labels_select == "Yes": #set custom_labels=labels #end if #set files=[] @@ -533,7 +533,7 @@ #silent $labels.append("'%s'" % $identifier) #end for #end if - #if $custom_labels_conditional.custom_labels_select == "Yes": + #if $custom_sample_labels_conditional.custom_labels_select == "Yes": #set labels=custom_labels #end if ]]>
--- a/test-data/estimateReadFiltering.txt Tue Feb 19 10:31:31 2019 -0500 +++ b/test-data/estimateReadFiltering.txt Wed Feb 20 09:23:59 2019 -0500 @@ -1,3 +1,3 @@ Sample Total Reads Mapped Reads Alignments in blacklisted regions Estimated mapped reads filtered Below MAPQ Missing Flags Excluded Flags Internally-determined Duplicates Marked Duplicates Singletons Wrong strand -paired_chr2L.bam 12644 12589 0 1395.9 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 -paired_chr2L.bam 12644 12589 0 1395.9 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 +paired_chr2L.bam 12644 12589 0 4192.0 4149.0 0.0 0.0 0.0 0.0 55.0 0.0 +paired_chr2L.bam 12644 12589 0 4192.0 4149.0 0.0 0.0 0.0 0.0 55.0 0.0