Mercurial > repos > bgruening > deeptools_bam_coverage

diff bamCoverage.xml @ 1:66947f20a9a8 draft
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 4fc171a2e9d37ef865695a04ff1b12068d8fe427
author: bgruening
date: Fri, 18 Dec 2015 08:00:06 -0500
parents: af2607db5c89
children: 8c6f450d266c
--- a/bamCoverage.xml	Wed Dec 16 16:37:45 2015 -0500
+++ b/bamCoverage.xml	Fri Dec 18 08:00:06 2015 -0500
@@ -41,7 +41,7 @@
                 #end if
 
                 @ADVANCED_OPTS_READ_PROCESSING@
-                $advancedOpt.keepNAs
+                $advancedOpt.skipNAs
 
                 if str($advancedOpt.ignoreForNormalization).strip() != '':
                     --ignoreForNormalization $advancedOpt.ignoreForNormalization
@@ -98,7 +98,7 @@
                         considering samples with unequal coverage across
                         chromosomes like male samples. Example: chrX chrM" />
 
-                <expand macro="keepNAs" />
+                <expand macro="skipNAs" />
                 <expand macro="read_processing_options" />
 
                 <param argument="--MNase" type="boolean" truevalue="--MNase" falsevalue=""