Mercurial > repos > bgruening > deeptools

changeset 56:6249d6d1cef3 draft

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Uploaded
author bgruening
date Thu, 22 Jan 2015 17:43:13 -0500
parents 51c21e40ec5c
children 00381d554d6a
files deepTools_macros.xml tool_dependencies.xml
diffstat 2 files changed, 13 insertions(+), 13 deletions(-) [+]
line wrap: on
line diff
--- a/deepTools_macros.xml	Wed Jan 21 09:29:46 2015 -0500
+++ b/deepTools_macros.xml	Thu Jan 22 17:43:13 2015 -0500
@@ -46,7 +46,7 @@
             <requirement type="package" version="0.14">scipy</requirement>
             <requirement type="package" version="1.4">matplotlib</requirement>
             <requirement type="package" version="0.1.19">samtools</requirement>
-            <requirement type="package" version="12-2013">bx-python</requirement>
+            <requirement type="package" version="0.7.1">bx-python</requirement>
             <yield />
         </requirements>
         <version_command>@BINARY@ --version</version_command>
--- a/tool_dependencies.xml	Wed Jan 21 09:29:46 2015 -0500
+++ b/tool_dependencies.xml	Thu Jan 22 17:43:13 2015 -0500
@@ -4,22 +4,22 @@
         <repository changeset_revision="632f1a03db92" name="package_samtools_0_1_19" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="numpy" version="1.9">
-        <repository changeset_revision="49a8bba001d7" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="5bd85e0058d6" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="matplotlib" version="1.4">
-        <repository changeset_revision="1bf5edeeaf42" name="package_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="9aa9fd9e3e32" name="package_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="scipy" version="0.14">
-        <repository changeset_revision="8512070824f3" name="package_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="38e76888714c" name="package_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="pysam" version="0.7.7">
-        <repository changeset_revision="240d1ad9f207" name="package_pysam_0_7_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="b41326f74b1d" name="package_pysam_0_7_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
-    <package name="bx-python" version="12-2013">
-        <repository changeset_revision="5457e32b427c" name="package_bx_python_12_2013" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    <package name="bx-python" version="0.7.1">
+        <repository changeset_revision="411b6d0c27dc" name="package_bx_python_0_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="python" version="2.7">
-        <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="dffe84445ebd" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="ucsc_tools" version="0.1">
         <install version="1.0">
@@ -63,24 +63,24 @@
         <install version="1.0">
             <actions>
                 <action type="set_environment_for_install">
-                    <repository changeset_revision="240d1ad9f207" name="package_pysam_0_7_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="b41326f74b1d" name="package_pysam_0_7_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="pysam" version="0.7.7" />
                     </repository>
                     <repository changeset_revision="5457e32b427c" name="package_bx_python_12_2013" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="bx-python" version="12-2013" />
                     </repository>
-                    <repository changeset_revision="49a8bba001d7" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="5bd85e0058d6" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="numpy" version="1.9" />
                     </repository>
-                    <repository changeset_revision="1bf5edeeaf42" name="package_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="9aa9fd9e3e32" name="package_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="matplotlib" version="1.4" />
                     </repository>
-                    <repository changeset_revision="8512070824f3" name="package_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                    <repository changeset_revision="38e76888714c" name="package_scipy_0_14" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                         <package name="scipy" version="0.14" />
                     </repository>
                 </action>
                 <action type="setup_python_environment">
-                   <repository changeset_revision="74d009a2a4cb" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                   <repository changeset_revision="dffe84445ebd" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="python" version="2.7" />
                    </repository>
                     <!-- allow downloading and installing an Python package from https://pypi.org/ -->