# HG changeset patch
# User iuc
# Date 1442942281 14400
# Node ID aa76a7fa6f821971845e4911e66dac901573a210
# Parent  e775e367268a8d7bba5fd4c753d7ad0952d4701e
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 3bc1d1c6f4e28ac7ff8df79fe4e3f00a195938e6-dirty

diff -r e775e367268a -r aa76a7fa6f82 deepTools_macros.xml
--- a/deepTools_macros.xml	Mon Sep 21 13:15:28 2015 -0400
+++ b/deepTools_macros.xml	Tue Sep 22 13:18:01 2015 -0400
@@ -215,7 +215,7 @@
         #set labels=[]
         #for $counter, $bamfile in enumerate($bamfiles):
             ln -s "${bamfile}" "./${counter}.bam" &&
-            ln -s "${bamfile}" "./${counter}.bam.bai" &&
+            ln -s "${bamfile.metadata.bam_index}" "./${counter}.bam.bai" &&
             #silent $files.append('%s.bam' % $counter)
             #silent $labels.append("'%s'" % ($bamfile.display_name))
         #end for
diff -r e775e367268a -r aa76a7fa6f82 tool_dependencies.xml
--- a/tool_dependencies.xml	Mon Sep 21 13:15:28 2015 -0400
+++ b/tool_dependencies.xml	Tue Sep 22 13:18:01 2015 -0400
@@ -4,6 +4,6 @@
         <repository changeset_revision="94e61bd56e40" name="package_python_2_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
     <package name="deepTools" version="1.5.11">
-        <repository changeset_revision="30c958a8db0e" name="package_python_2_7_deeptools_1_5_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+        <repository changeset_revision="0eaccc10220c" name="package_python_2_7_deeptools_1_5_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
     </package>
 </tool_dependency>