# HG changeset patch
# User bgruening
# Date 1391253158 18000
# Node ID 9afae9d021cddc1eea2bc9c28f0f988d767afd77
# Parent  2f7edf06a5da41e72de4674653c2e735602aafa1
Uploaded

diff -r 2f7edf06a5da -r 9afae9d021cd deepTools_macros.xml
--- a/deepTools_macros.xml	Sat Feb 01 06:04:58 2014 -0500
+++ b/deepTools_macros.xml	Sat Feb 01 06:12:38 2014 -0500
@@ -187,15 +187,19 @@
                 help="The effective genome size is the portion of the genome that is mappable. Large fractions of the genome are stretches of NNNN that should be discarded. 
                     Also, if repetitive regions were not included in the mapping of reads, the effective genome size needs to be adjusted accordingly. 
                     See Table 2 of http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0030377 or http://www.nature.com/nbt/journal/v27/n1/fig_tab/nbt.1518_T1.html for several effective genome sizes.">
+                <option value="93260000">ce10 (93260000)</option>
+                <option value="121400000">dm3 (121400000)</option>
+                <option value="2451960000" selected="true">hg19 (2451960000)</option>
                 <option value="2150570000">mm9 (2150570000)</option>
-                <option value="2451960000">hg19 (2451960000)</option>
-                <option value="121400000">dm3 (121400000)</option>
-                <option value="93260000">ce10 (93260000)</option>
                 <option value="specific">user specified</option>
             </param>
             <when value="specific">
                 <param name="effectiveGenomeSize" type="integer" value="" label="Effective genome size" />
             </when>
+            <when value="2150570000" />
+            <when value="2451960000" />
+            <when value="121400000" />
+            <when value="93260000" />
         </conditional>
     </xml>