Mercurial > repos > bgruening > deeptools

diff deepTools_macros.xml @ 29:60788be7b346 draft

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Uploaded
author bgruening
date Sat, 21 Dec 2013 17:30:26 -0500
parents 1e5fcb1555de
children 2e5b92e7f3cb
line wrap: on
line diff
--- a/deepTools_macros.xml	Mon Dec 16 04:51:41 2013 -0500
+++ b/deepTools_macros.xml	Sat Dec 21 17:30:26 2013 -0500
@@ -43,7 +43,7 @@
             <requirement type="package" >samtools</requirement>
             <requirement type="package" >deepTools</requirement>
             <requirement type="package" >ucsc_tools</requirement>
-            <requirement type="package" version="1.5.4_74aac0843a956ca352e3e85087f20c8f158e2f7d">deepTools</requirement>
+            <requirement type="package" version="1.5.4_e5c75f3e967be0fa1d6dbcbb63a0f992e1cdcd61">deepTools</requirement>
             <requirement type="package" version="0.1">ucsc_tools</requirement>
             <requirement type="package" version="1.7.1">numpy</requirement>
             <requirement type="package" version="0.7.7">pysam</requirement>
@@ -91,6 +91,10 @@
     </xml>
 
     <token name="@multiple_input_bams@">
+        #import tempfile
+        #set $temp_dir = os.path.abspath(tempfile.mkdtemp())
+        #set files=[]
+        #set labels=[]
         #for $i in $input_files:
             #set $temp_input_handle = tempfile.NamedTemporaryFile( dir=$temp_dir )
             #set $temp_input_path = $temp_input_handle.name