comparison profiler.xml @ 43:c5787c91cab8 draft

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42:ef1232cedacb

<tool id="deeptools_profiler" name="profiler" version="1.0.3">
    <description>
        creates a profile plot for a score associated to genomic regions
    </description>
    <expand macro="requirements" />
    <expand macro="stdio" />

    <help>

**What it does**

This tool plots the average enrichments over all genomic
regions supplied to computeMarix. It is a very useful complement to the
heatmapper, especially in cases when you want to compare the scores for
many different groups. Like heatmapper, profiler does not change the
values that were compute by computeMatrix, but you can choose between
many different ways to color and display the plots.


.. image:: $PATH_TO_IMAGES/visual_profiler_DmelPolII.png
   :alt: Meta-gene profile of Rna Polymerase II


You can find more details in the `profiler wiki`_.

.. _profiler wiki: https://github.com/fidelram/deepTools/wiki/Visualizations#wiki-profiler


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@REFERENCES@

43:c5787c91cab8

<tool id="deeptools_profiler" name="profiler" version="1.0.4">
    <description>
        creates a profile plot for a score associated to genomic regions
    </description>
    <expand macro="requirements" />
    <expand macro="stdio" />

    <help>

**What it does**

This tool plots the average enrichments over all genomic
regions supplied to computeMarix. It requires that computeMatrix was successfully run.
It is a very useful complement to the heatmapper, especially in cases when you want to
compare the scores for many different groups. Like heatmapper, profiler does not change the
values that were compute by computeMatrix, but you can choose between
many different ways to color and display the plots.


.. image:: $PATH_TO_IMAGES/visual_profiler_DmelPolII.png
   :alt: Meta-gene profile of Rna Polymerase II


You can find more details on the profiler wiki page: https://github.com/fidelram/deepTools/wiki/Visualizations#wiki-profiler


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@REFERENCES@