Mercurial > repos > bgruening > deeptools
comparison deepTools_macros.xml @ 75:aa76a7fa6f82 draft
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 3bc1d1c6f4e28ac7ff8df79fe4e3f00a195938e6-dirty
| author | iuc |
|---|---|
| date | Tue, 22 Sep 2015 13:18:01 -0400 |
| parents | bf8a2284232c |
| children | d54881c558b8 |
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| 74:e775e367268a | 75:aa76a7fa6f82 |
|---|---|
| 213 <![CDATA[ | 213 <![CDATA[ |
| 214 #set files=[] | 214 #set files=[] |
| 215 #set labels=[] | 215 #set labels=[] |
| 216 #for $counter, $bamfile in enumerate($bamfiles): | 216 #for $counter, $bamfile in enumerate($bamfiles): |
| 217 ln -s "${bamfile}" "./${counter}.bam" && | 217 ln -s "${bamfile}" "./${counter}.bam" && |
| 218 ln -s "${bamfile}" "./${counter}.bam.bai" && | 218 ln -s "${bamfile.metadata.bam_index}" "./${counter}.bam.bai" && |
| 219 #silent $files.append('%s.bam' % $counter) | 219 #silent $files.append('%s.bam' % $counter) |
| 220 #silent $labels.append("'%s'" % ($bamfile.display_name)) | 220 #silent $labels.append("'%s'" % ($bamfile.display_name)) |
| 221 #end for | 221 #end for |
| 222 ]]> | 222 ]]> |
| 223 </token> | 223 </token> |