# HG changeset patch # User bgruening # Date 1423386263 18000 # Node ID 5f15a8bcca7212114b49750c0a6d75aadfc4fb23 # Parent a54ec247ad5279df8b73d157556860ba089544d9 Uploaded diff -r a54ec247ad52 -r 5f15a8bcca72 data_manager/data_manager_diamond_database_builder.py --- a/data_manager/data_manager_diamond_database_builder.py Sun Feb 08 04:00:13 2015 -0500 +++ b/data_manager/data_manager_diamond_database_builder.py Sun Feb 08 04:04:23 2015 -0500 @@ -201,14 +201,14 @@ sys.exit( return_code ) tmp_stderr.close() os.remove( temp_fasta.name ) - return dict( value=database_id, name=database_name, path="%s.dmnd" % fasta_base_filename ) + return dict( value=database_id, name=database_name, db_path="%s.dmnd" % fasta_base_filename ) def _create_symlink( input_filename, target_directory, database_id, database_name ): fasta_base_filename = "%s.fa" % database_id fasta_filename = os.path.join( target_directory, fasta_base_filename ) os.symlink( input_filename, fasta_filename ) - return dict( value=database_id, name=database_name, path=fasta_base_filename ) + return dict( value=database_id, name=database_name, db_path=fasta_base_filename ) REFERENCE_SOURCE_TO_DOWNLOAD = dict( ncbi=download_from_ncbi, url=download_from_url, history=download_from_history, directory=copy_from_directory )