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view data_manager_conf.xml @ 14:34ce6933d52a draft

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author bgruening
date Sun, 08 Feb 2015 09:51:41 -0500
parents 1b449216bf00
children cd9e4ee63761
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<?xml version="1.0"?>
<data_managers>
    <data_manager tool_file="data_manager/data_manager_diamond_database_builder.xml" id="diamond_database_builder" version="0.0.1">
        <data_table name="diamond_database">
            <output>
                <column name="value" />
                <column name="name" />
                <column name="db_path" output_ref="out_file" >
                    <move type="directory" relativize_symlinks="True">
                        <!-- <source>${db_path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">diamond_database/${value}</target>
                    </move>
                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/diamond_database/${value}/${db_path}</value_translation>
                    <value_translation type="function">abspath</value_translation>
                </column>
            </output>
        </data_table>
    </data_manager>
</data_managers>