Mercurial > repos > bgruening > cp_cellprofiler4
comparison cellprofiler.xml @ 1:e6b2ab8769a7 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools commit d18fae96f65d1b748fbd21b92b75ca3181fdd8bc
| author | bgruening |
|---|---|
| date | Mon, 05 Aug 2024 15:29:55 +0000 |
| parents | 5f72bcf26c29 |
| children |
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| 0:5f72bcf26c29 | 1:e6b2ab8769a7 |
|---|---|
| 1 <tool id="cp_cellprofiler4" name="CellProfiler" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> | 1 <tool id="cp_cellprofiler4" name="Run CellProfiler pipeline" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> |
| 2 <description>run a CellProfiler pipeline</description> | 2 <description>with CellProfiler 4</description> |
| 3 <macros> | 3 <macros> |
| 4 <import>macros.xml</import> | 4 <import>macros.xml</import> |
| 5 <token name="@VERSION_SUFFIX@">0</token> | 5 <token name="@VERSION_SUFFIX@">0</token> |
| 6 <xml name="test_assert_content" token_n="291"> | 6 <xml name="test_assert_content" token_n="291"> |
| 7 <assert_contents> | 7 <assert_contents> |
| 71 </conditional> | 71 </conditional> |
| 72 <param name="detailed_output" value="False" /> | 72 <param name="detailed_output" value="False" /> |
| 73 <output_collection name="pipeline_output" type="list" count="7"> | 73 <output_collection name="pipeline_output" type="list" count="7"> |
| 74 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> | 74 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> |
| 75 <assert_contents> | 75 <assert_contents> |
| 76 <has_size value="168221"/> | 76 <has_size value="182983"/> |
| 77 </assert_contents> | 77 </assert_contents> |
| 78 </element> | 78 </element> |
| 79 <element name="Cells"> | 79 <element name="Cells"> |
| 80 <expand macro="test_assert_content" n="290" /> | 80 <expand macro="test_assert_content" n="290" /> |
| 81 </element> | 81 </element> |
| 104 </conditional> | 104 </conditional> |
| 105 <param name="detailed_output" value="True" /> | 105 <param name="detailed_output" value="True" /> |
| 106 <output_collection name="pipeline_output" type="list" count="7"> | 106 <output_collection name="pipeline_output" type="list" count="7"> |
| 107 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> | 107 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> |
| 108 <assert_contents> | 108 <assert_contents> |
| 109 <has_size value="168221"/> | 109 <has_size value="182983"/> |
| 110 </assert_contents> | 110 </assert_contents> |
| 111 </element> | 111 </element> |
| 112 <element name="Cells"> | 112 <element name="Cells"> |
| 113 <expand macro="test_assert_content" n="290" /> | 113 <expand macro="test_assert_content" n="290" /> |
| 114 </element> | 114 </element> |
| 143 </conditional> | 143 </conditional> |
| 144 <param name="detailed_output" value="False" /> | 144 <param name="detailed_output" value="False" /> |
| 145 <output_collection name="pipeline_output" type="list" count="7"> | 145 <output_collection name="pipeline_output" type="list" count="7"> |
| 146 <element name="AS_09125_050116030001_D03f00d0_Overlay"> | 146 <element name="AS_09125_050116030001_D03f00d0_Overlay"> |
| 147 <assert_contents> | 147 <assert_contents> |
| 148 <has_size value="168221"/> | 148 <has_size value="182983"/> |
| 149 </assert_contents> | 149 </assert_contents> |
| 150 </element> | 150 </element> |
| 151 <element name="Cells"> | 151 <element name="Cells"> |
| 152 <expand macro="test_assert_content" n="290" /> | 152 <expand macro="test_assert_content" n="290" /> |
| 153 </element> | 153 </element> |
| 176 </conditional> | 176 </conditional> |
| 177 <param name="detailed_output" value="True" /> | 177 <param name="detailed_output" value="True" /> |
| 178 <output_collection name="pipeline_output" type="list" count="7"> | 178 <output_collection name="pipeline_output" type="list" count="7"> |
| 179 <element name="AS_09125_050116030001_D03f00d0_Overlay"> | 179 <element name="AS_09125_050116030001_D03f00d0_Overlay"> |
| 180 <assert_contents> | 180 <assert_contents> |
| 181 <has_size value="168221"/> | 181 <has_size value="182983"/> |
| 182 </assert_contents> | 182 </assert_contents> |
| 183 </element> | 183 </element> |
| 184 <element name="Cells"> | 184 <element name="Cells"> |
| 185 <expand macro="test_assert_content" n="290" /> | 185 <expand macro="test_assert_content" n="290" /> |
| 186 </element> | 186 </element> |