Mercurial > repos > bgruening > bismark

changeset 29:b52b7fdefd72 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit 8a26d7022e3535d995aec277e15d7d04800965e4
author bgruening
date Wed, 05 Jun 2019 07:43:45 -0400
parents 4e274666de78
children 50c594522ed2
files bismark_methylation_extractor.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/bismark_methylation_extractor.xml	Thu May 02 18:27:03 2019 -0400
+++ b/bismark_methylation_extractor.xml	Wed Jun 05 07:43:45 2019 -0400
@@ -46,7 +46,7 @@
         #if $cytosine_report['cytosine_report_selector']:
           --cytosine_report '$output_cytosine_report'
           #if $cytosine_report.refGenomeSource.genomeSource == "built_in_fasta":
-            --genome_file '{cytosine_report.refGenomeSource.built_in_fasta.fields.path}'
+            --genome_file '${cytosine_report.refGenomeSource.built_in_fasta.fields.path}'
           #else:
             --genome_file '$cytosine_report.refGenomeSource["own_file"]'
           #end if