comparison bioimage_inference.xml @ 1:a1bf1c6c5fac draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/recommendation_training/tools/bioimaging commit 3564cc70b5eb512031ac122534b5c2ff2e558274

0:9f9ae2ac7820

<tool id="bioimage_inference" name="Process image using a BioImage.IO model" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.0">
    <description>with PyTorch</description>
    <macros>
        <token name="@TOOL_VERSION@">2.3.1</token>
        <token name="@VERSION_SUFFIX@">0</token>
    </macros>
    <creator>
        <organization name="European Galaxy Team" url="https://galaxyproject.org/eu/" />
        <person givenName="Anup" familyName="Kumar" email="[e-mail]" />

        <xref type="biii">pytorch</xref>
    </xrefs>
    <requirements>
        <requirement type="package" version="3.9.12">python</requirement>
        <requirement type="package" version="@TOOL_VERSION@">pytorch</requirement>
        <requirement type="package" version="0.18.1">torchvision</requirement>
        <requirement type="package" version="2.34.2">imageio</requirement>
    </requirements>
    <version_command>echo "@VERSION@"</version_command>
    <command detect_errors="aggressive">
    <![CDATA[
        python '$__tool_directory__/main.py'

1:a1bf1c6c5fac

<tool id="bioimage_inference" name="Process image using a BioImage.IO model" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="23.0">
    <description>with PyTorch</description>
    <macros>
        <token name="@TOOL_VERSION@">2.4.0</token>
        <token name="@VERSION_SUFFIX@">0</token>
    </macros>
    <creator>
        <organization name="European Galaxy Team" url="https://galaxyproject.org/eu/" />
        <person givenName="Anup" familyName="Kumar" email="[e-mail]" />

        <xref type="biii">pytorch</xref>
    </xrefs>
    <requirements>
        <requirement type="package" version="3.9.12">python</requirement>
        <requirement type="package" version="@TOOL_VERSION@">pytorch</requirement>
        <requirement type="package" version="0.19.0">torchvision</requirement>
        <requirement type="package" version="2.35.1">imageio</requirement>
    </requirements>
    <version_command>echo "@VERSION@"</version_command>
    <command detect_errors="aggressive">
    <![CDATA[
        python '$__tool_directory__/main.py'