Mercurial > repos > bgruening > bedtools_test_bag

diff genomeCoverageBed_bedgraph.xml @ 12:c782e0edc4f1 draft default tip

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Uploaded
author bgruening
date Thu, 19 Jun 2014 10:12:00 -0400
parents b78d20957e7f
children
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line diff
--- a/genomeCoverageBed_bedgraph.xml	Wed Jun 18 15:07:04 2014 -0400
+++ b/genomeCoverageBed_bedgraph.xml	Thu Jun 19 10:12:00 2014 -0400
@@ -1,4 +1,4 @@
-<tool id="bedtools_genomecoveragebed_bedgraph" name="Create a BedGraph of genome coverage" version="0.2.0">
+<tool id="bedtools_genomecoveragebed_bedgraph" name="Create a BedGraph of genome coverage" version="@WRAPPER_VERSION@.0">
     <description>
     </description>
     <macros>
@@ -45,23 +45,6 @@
     <outputs>
         <data format="bedgraph" name="output"  metadata_source="input" label="${input.name} (Genome Coverage BedGraph)" />
     </outputs>
-
-$ cat A.bed
-chr1  10  20
-chr1  20  30
-chr2  0   500
-
-$ cat my.genome
-chr1  1000
-chr2  500
-
-$ bedtools genomecov -i A.bed -g my.genome
-chr1   0  980  1000  0.98
-chr1   1  20   1000  0.02
-chr2   1  500  500   1
-genome 0  980  1500  0.653333
-genome 1  520  1500  0.346667
-
     <help>