Mercurial > repos > bgruening > augustus_training

changeset 2:0e9e17d6364e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit c659b84bf74f5abb260ee49ce76b61e5d5fa29c1
author iuc
date Thu, 30 May 2019 06:57:33 -0400
parents 2c4b780eb9f9
children 7d3fa213c3d3
files augustus_training.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/augustus_training.xml	Thu May 23 18:16:21 2019 -0400
+++ b/augustus_training.xml	Thu May 30 06:57:33 2019 -0400
@@ -8,7 +8,7 @@
         <requirement type="package" version="2.31.10">maker</requirement>
     </expand>
     <command><![CDATA[
-        cp -r "\$AUGUSTUS_CONFIG_PATH" augustus_dir/ &&
+        cp -r `which augustus | xargs dirname`/../config/ augustus_dir/ &&
 
         export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ &&