# HG changeset patch # User bernhardlutz # Date 1387834097 18000 # Node ID ecd787bb0ccfeaccb40de20bb15b7ad08c48a00a # Parent 6c536f6011fdf8619acffe4b6293262cf59cab76 Uploaded diff -r 6c536f6011fd -r ecd787bb0ccf rnaz.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/rnaz.xml Mon Dec 23 16:28:17 2013 -0500 @@ -0,0 +1,22 @@ + + + + rnaz + + +RNAz $inputaln $outfile + + + + + + + + + + + + **What it does** + RNAz is a program for predicting structurally conserved and thermodynamically stable RNA secondary structures in multiple sequence alignments. It can be used in genome wide screens to detect functional RNA structures, as found in noncoding RNAs and cis-acting regulatory elements of mRNAs. + + diff -r 6c536f6011fd -r ecd787bb0ccf tool_dependencies.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Dec 23 16:28:17 2013 -0500 @@ -0,0 +1,14 @@ + + + + + http://www.tbi.univie.ac.at/~wash/RNAz/RNAz-2.1.tar.gz + + + $INSTALL_DIR/bin + + + + Compiling RNAz requires a C compiler (typically gcc) + +