# HG changeset patch
# User bernhardlutz
# Date 1387837593 18000
# Node ID c614f623f8f5d6554660bced90117b30d6c0968d
# Parent  415552882f63235086d2ed86486b94b34103b51c
Uploaded

diff -r 415552882f63 -r c614f623f8f5 rnaz.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rnaz.xml	Mon Dec 23 17:26:33 2013 -0500
@@ -0,0 +1,22 @@
+<tool id="rnaz" name="RNAz" version="0.1.0">
+    <description></description>
+    <requirements>
+        <requirement type="package" version="2.1">rnaz</requirement>
+    </requirements>
+    <command>
+RNAz $inputaln $outfile
+    </command>
+    <stdio>
+        <exit_code range="1:" level="fatal" description="Error occurred. Please check Tool Standard Error" />
+        <exit_code range=":-1" level="fatal" description="Error occurred. Please check Tool Standard Error" />
+    </stdio>
+    <inputs>
+        <param format="aln" name="inputaln" type="data" label="Input Alignment File" />
+    </inputs>
+    <outputs>
+        <data name="outfile" format="txt" />
+    </outputs>
+    <help>**What it does**
+     RNAz is a program for predicting structurally conserved and thermodynamically stable RNA secondary structures in multiple sequence alignments. It can be used in genome wide screens to detect functional RNA structures, as found in noncoding RNAs and cis-acting regulatory elements of mRNAs.
+    </help>
+</tool>