# HG changeset patch
# User bernhardlutz
# Date 1387733538 18000
# Node ID 30e23427bb9f4dcf7aefad9195fe1e4e1bae2b3f
# Parent  571d8a6ab03fbd8ef615b921ef1220190dc6d283
Deleted selected files

diff -r 571d8a6ab03f -r 30e23427bb9f rnaz.xml
--- a/rnaz.xml	Sun Dec 22 12:04:11 2013 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,22 +0,0 @@
-<tool id="rnaz" name="RNAz" version="0.1.0">
-    <description></description>
-    <requirements>
-        <requirement type="package" version="1.0">rnaz</requirement>
-    </requirements>
-    <command>
-RNAz $inputaln $outfile
-    </command>
-    <stdio>
-        <exit_code range="1:" level="fatal" description="Error occurred. Please check Tool Standard Error" />
-        <exit_code range=":-1" level="fatal" description="Error occurred. Please check Tool Standard Error" />
-    </stdio>
-    <inputs>
-        <param format="aln" name="inputaln" type="data" label="Input Alignment File" />
-    </inputs>
-    <outputs>
-        <data name="outfile" format="txt" />
-    </outputs>
-    <help>**What it does**
-     
-    </help>
-</tool>
diff -r 571d8a6ab03f -r 30e23427bb9f tool_dependencies.xml
--- a/tool_dependencies.xml	Sun Dec 22 12:04:11 2013 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,24 +0,0 @@
-<?xml version="1.0"?>
-<tool_dependency>
-    <package name="vienna_rna" version="1.8.5">
-        <repository changeset_revision="53e25262a701" name="package_vienna_rna_1_8" owner="bgruening" prior_installation_required="True" toolshed="http://testtoolshed.g2.bx.psu.edu" />
-    </package>
-    <package name="exparna" version="1.0">
-        <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://www.bioinf.uni-freiburg.de/Software/expaRNA/exparna-1.0.tar.gz</action>
-                <action type="set_environment_for_install">
-                    <repository changeset_revision="53e25262a701" name="package_vienna_rna_1_8" owner="bgruening" toolshed="http://testtoolshed.g2.bx.psu.edu">
-                        <package name="vienna_rna" version="1.8.5" />
-                    </repository>
-                </action>
-                <action type="shell_command">./configure --prefix $INSTALL_DIR --with-RNA=$ROOT_VIENNA_RNA_DIR</action>
-                 <action type="make_install" />
-                <action type="set_environment">
-                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-                </action>
-            </actions>
-        </install>
-        <readme>Compiling ExpaRNA requires a C compiler (typically gcc)</readme>
-    </package>
-</tool_dependency>