view rest_tool.py @ 0:a9793e52a3ef draft

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#!/usr/bin/env python
# Aufruf convert_graph.py --type type --id id  --outformat format

import sys, os
import networkx as nx
import argparse
import json

from xgmml_networkx import XGMMLParserHelper, XGMMLWriter
from networkx.readwrite import json_graph

#supported graph_types
output_types = ["tsv", "csv", "png", "json", "txt", "xml", "sdf", "asnt", "asnb", "jsonp"]

def main(args):
    
if __name__ == "__main__":
    
    parser = argparse.ArgumentParser()
    parser.add_argument('--type', type=str,
        help="That you want BioAssay Compund ...")
    parser.add_argument('--id', type=str,
        help="Specify the format of the input graph")
    parser.add_argument('--outformat', type=str,
        help="Specify the format of the output", choices = output_types)
    if len(sys.argv) < 6:
        print "Too few arguments..."
        parser.print_help()
        exit(1)
    args = parser.parse_args()
    main( args )