Mercurial > repos > bebatut > plot_generic_x_y_plot
annotate plot_generic_x_y_plot.R @ 2:5aef8588b14e draft default tip
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit e4da8b5a999456b2b6dabdf6b8f3bfea1eba5504-dirty
author | bebatut |
---|---|
date | Mon, 18 Apr 2016 11:09:40 -0400 |
parents | c0e2af569838 |
children |
rev | line source |
---|---|
0
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
1 library('getopt') |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
2 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
3 option_specification = matrix(c( |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
4 'input_file', 'a', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
5 'output_pdf_file', 'b', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
6 'output_png_file', 'c', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
7 'output_svg_file', 'd', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
8 'x_column_id', 'e', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
9 'y_column_id', 'f', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
10 'xlog', 'g', 2, 'logical', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
11 'ylog', 'h', 2, 'logical', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
12 'xlab', 'i', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
13 'ylab', 'j', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
14 'col', 'k', 2, 'character', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
15 'pch', 'l', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
16 'lim', 'm', 2, 'logical', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
17 'abline', 'n', 2, 'logical', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
18 'bottom_margin', 'o', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
19 'left_margin', 'p', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
20 'top_margin', 'q', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
21 'right_margin', 'r', 2, 'integer', |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
22 'header','s',2,'logical' |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
23 ), byrow=TRUE, ncol=4); |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
24 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
25 options = getopt(option_specification); |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
26 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
27 header = TRUE |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
28 if(!is.null(options$header)) header = options$header |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
29 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
30 data = read.table(options$input_file, sep = '\t', h = header) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
31 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
32 x_column_id = 2 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
33 if(!is.null(options$x_column_id)) x_column_id = options$x_column_id |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
34 x_axis = data[,x_column_id] |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
35 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
36 y_column_id = 3 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
37 if(!is.null(options$y_column_id)) y_column_id = options$y_column_id |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
38 y_axis = data[,y_column_id] |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
39 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
40 xlim = c(min(x_axis),max(x_axis)) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
41 ylim = c(min(y_axis),max(y_axis)) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
42 if(!is.null(options$lim) && options$lim){ |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
43 xlim = c(min(xlim,ylim), max(xlim,ylim)) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
44 ylim = xlim |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
45 } |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
46 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
47 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
48 xlab = "" |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
49 if(!is.null(options$xlab)) xlab = options$xlab |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
50 ylab = "" |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
51 if(!is.null(options$ylab)) ylab = options$ylab |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
52 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
53 col = 'grey25' |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
54 if(!is.null(options$col)) col = options$col |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
55 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
56 pch = 21 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
57 if(!is.null(options$pch)) pch = options$pch |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
58 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
59 log = "" |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
60 if(!is.null(options$xlog) && options$xlog) log = paste(log,"x",sep = '') |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
61 if(!is.null(options$ylog) && options$ylog) log = paste(log,"y",sep = '') |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
62 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
63 margin = c(5,5,1,1) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
64 if(!is.null(options$bottom_margin)) margin[1] = options$bottom_margin |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
65 if(!is.null(options$left_margin)) margin[2] = options$left_margin |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
66 if(!is.null(options$top_margin)) margin[3] = options$top_margin |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
67 if(!is.null(options$right_margin)) margin[4] = options$right_margin |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
68 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
69 plot_generic_x_y_plot <- function(){ |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
70 par(mar=margin) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
71 plot(x_axis, y_axis, xlab = xlab, ylab = ylab, |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
72 col = col, log = log, xlim = xlim, ylim = ylim, pch = pch) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
73 if(!is.null(options$abline) && options$abline) abline(a = 0, b = 1, col = 'grey50') |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
74 } |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
75 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
76 if(!is.null(options$output_pdf_file)){ |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
77 pdf(options$output_pdf_file) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
78 plot_generic_x_y_plot() |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
79 dev.off() |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
80 } |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
81 |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
82 if(!is.null(options$output_svg_file)){ |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
83 svg(options$output_svg_file) |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
84 plot_generic_x_y_plot() |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
85 dev.off() |
c0e2af569838
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_generic_x_y_plot commit 5c45ed58045ce1686aa069403f8a9426ea20bac5-dirty
bebatut
parents:
diff
changeset
|
86 } |