Mercurial > repos > bebatut > plot_barplot
comparison plot_barplot.xml @ 4:fe4ee3b643f0 draft
planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_barplot commit 74beefba9d138c892208b103b52e706ab4313a4a-dirty
| author | bebatut |
|---|---|
| date | Mon, 18 Apr 2016 10:34:56 -0400 |
| parents | 81d4e20b0b23 |
| children | 2a9b68111074 |
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| 3:81d4e20b0b23 | 4:fe4ee3b643f0 |
|---|---|
| 73 <filter>output_format=="svg"</filter> | 73 <filter>output_format=="svg"</filter> |
| 74 </data> | 74 </data> |
| 75 </outputs> | 75 </outputs> |
| 76 | 76 |
| 77 <tests> | 77 <tests> |
| 78 <test> | |
| 79 <param name="input_file" value="input_file.txt"/> | |
| 80 <param name="header" value="FALSE"/> | |
| 81 <param name="output_format" value="pdf"/> | |
| 82 <param name="column_with_data" value="2"/> | |
| 83 <param name="names_column" value="1"/> | |
| 84 <param name="xlab" value=""/> | |
| 85 <param name="col" value="blue"/> | |
| 86 <param name="bottom_margin" value="5"/> | |
| 87 <param name="left_margin" value="19"/> | |
| 88 <param name="top_margin" value="1"/> | |
| 89 <param name="right_margin" value="1"/> | |
| 90 <output name="output_pdf_file" file="output_test_col_2.pdf"/> | |
| 91 </test> | |
| 92 <test> | |
| 93 <param name="input_file" value="input_file.txt"/> | |
| 94 <param name="header" value="FALSE"/> | |
| 95 <param name="output_format" value="pdf"/> | |
| 96 <param name="column_with_data" value="3"/> | |
| 97 <param name="names_column" value="1"/> | |
| 98 <param name="xlab" value=""/> | |
| 99 <param name="col" value="red"/> | |
| 100 <param name="bottom_margin" value="5"/> | |
| 101 <param name="left_margin" value="19"/> | |
| 102 <param name="top_margin" value="1"/> | |
| 103 <param name="right_margin" value="1"/> | |
| 104 <output name="output_pdf_file" file="output_test_col_3.pdf"/> | |
| 105 </test> | |
| 78 </tests> | 106 </tests> |
| 79 | 107 |
| 80 <help><![CDATA[ | 108 <help><![CDATA[ |
| 81 **What it does** | 109 **What it does** |
| 82 | 110 |
| 83 This tool plot a barplot from a tabular file into different format files given different customizable parameters. | 111 This tool plot a barplot. |
| 84 | 112 |
| 85 This tool relies on R's barplot function. | 113 .. image:: $PATH_TO_IMAGES/output.png |
| 114 :scale: 50 % | |
| 86 | 115 |
| 116 This tool relies on R's barplot function. The input file must be a tabular file with multiple columns: a column with row names (for bar names) and a least a column with data. The output image is customizable (margin, legend positions, ...) and can be export in different format. | |
| 87 ]]></help> | 117 ]]></help> |
| 88 | 118 |
| 89 <citations> | 119 <citations> |
| 90 </citations> | 120 </citations> |
| 91 </tool> | 121 </tool> |