comparison normalize_dataset.xml @ 1:de82a5a1469b draft default tip

planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/normalize_dataset commit 21b25425f77162c0edae4dd87b3a9e33608c5a95-dirty

0:2ac4623ac41c

<tool id="normalize_dataset" name="Normalize a dataset by" version="0.1.0">
    <description>row or column sum</description>

    <requirements>
    </requirements>

    <stdio>

        <data name="output_file" format="tabular"
            label="${tool.name} on ${on_string}: Normalized dataset" />
    </outputs>

    <tests>
    </tests>

    <help><![CDATA[
        **What it does**

        This tool normalizes each row or column of a dataset by the row or column sum.

    ]]></help>

    <citations>
    </citations>
</tool>

1:de82a5a1469b

<tool id="normalize_dataset" name="Normalize a dataset by" version="0.1.0">
    <description>row or column sum to obtain proportion or percentage</description>

    <requirements>
    </requirements>

    <stdio>

        <data name="output_file" format="tabular"
            label="${tool.name} on ${on_string}: Normalized dataset" />
    </outputs>

    <tests>
        <test>
            <param name="input_file" value="input_file.tabular"/>
            <param name="normalization" value="column"/>
            <param name="format" value="proportion"/>
            <output name="output_file" file="output_column_proportion.tabular"/>
        </test>
        <test>
            <param name="input_file" value="input_file.tabular"/>
            <param name="normalization" value="row"/>
            <param name="format" value="proportion"/>
            <output name="output_file" file="output_row_proportion.tabular"/>
        </test>
        <test>
            <param name="input_file" value="input_file.tabular"/>
            <param name="normalization" value="column"/>
            <param name="format" value="percentage"/>
            <output name="output_file" file="output_column_percentage.tabular"/>
        </test>
    </tests>

    <help><![CDATA[
**What it does**

This tool normalizes each row or column of a dataset by the row or column sum.
The results can be in proportion or percentage.

The input file must be in tabular format with tab-separated columns. Only data will be used for normalization.
    ]]></help>

    <citations>
    </citations>
</tool>