# HG changeset patch
# User bebatut
# Date 1446737519 18000
# Node ID bee6cb51b96d6e29d0dcaa365808e1b700982641
# Parent 84dd21255542b9a67c2a14121cfa0c4555235b3f
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit bf4b8a62e4414d68a917f5b72f3aedf34facaff2-dirty
diff -r 84dd21255542 -r bee6cb51b96d metaphlan2.xml
--- a/metaphlan2.xml Thu Nov 05 10:22:17 2015 -0500
+++ b/metaphlan2.xml Thu Nov 05 10:31:59 2015 -0500
@@ -35,9 +35,10 @@
--mpa_pkl \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200.pkl
--bowtie2db \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200
- $bowtie2_output
- #if not $bowtie2_output
+ # if $bowtie2_output:
--bowtie2out $bowtie2_output_file
+ # else:
+ --no_map
#end if
-t $analysis_type.analysis_type_select
@@ -112,7 +113,7 @@
-
+
@@ -125,7 +126,7 @@
- bowtie2_output != '--no_map'
+ bowtie2_output
-
+