Mercurial > repos > bebatut > metaphlan2

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/metaphlan2/ commit a6bf1721b4efa39b8cbcd059288c68e4abf8f9bd-dirty
author bebatut
date Tue, 21 Feb 2017 12:29:37 -0500
parents 713a83023626
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Galaxy wrappers for MetaPhlAn2
==============================

Galaxy should be able to automatically install the dependencies, i.e. the
MetaPhlAn2 binaries.

After installation, you must tell Galaxy about the defaut database with
clade-specific marker genes, and where to find it:

* Put the ``metaphlan2_db.loc`` file in the ``tool-data/`` folder, after uncommenting last line
* Download whole MetaPhlan2 source code: https://bitbucket.org/biobakery/metaphlan2/get/2.5.0.zip
* Unzip it
* Move ``db_v20`` folder into ``dependency_dir/metaphlan2/2.5.0/bebatut/package_metaphlan2_2_5_0/...`` folder