Mercurial > repos > bebatut > metaphlan2

diff metaphlan2_macros.xml @ 44:34114d4670fe draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan2/ commit b'cf8373aeed58964f1d139a23cd1ec4698683c60e\n'-dirty
author bebatut
date Thu, 02 Mar 2017 11:28:35 -0500
parents ac9a5ed88c42
children
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--- a/metaphlan2_macros.xml	Wed Mar 01 11:07:43 2017 -0500
+++ b/metaphlan2_macros.xml	Thu Mar 02 11:28:35 2017 -0500
@@ -25,4 +25,16 @@
           <citation type="doi">10.1038/nmeth.3589</citation>
       </citations>
     </xml>
+    <xml name="tax_lev">
+      <param argument="--tax_lev" type="select" label="Taxonomic level for the relative abundance output">
+        <option value="a" selected="true">All taxonomic levels</option>
+        <option value="k">Kingdoms (Bacteria and Archaea) only</option>
+        <option value="p">Phyla only</option>
+        <option value="c">Classes only</option>
+        <option value="o">Orders only</option>
+        <option value="f">Families only</option>
+        <option value="g">Genera only</option>
+        <option value="s">Species only</option>
+      </param>
+    </xml>
 </macros>