Mercurial > repos > bebatut > metaphlan2
diff metaphlan2krona.xml @ 29:713a83023626 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/metaphlan2/ commit 450bf3326f301c344103272b0d761e8625ce0c44-dirty
| author | bebatut |
|---|---|
| date | Wed, 01 Jun 2016 10:43:23 -0400 |
| parents | 1d993cca38e3 |
| children | 99fe591b59fb |
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--- a/metaphlan2krona.xml Thu Apr 28 07:04:50 2016 -0400 +++ b/metaphlan2krona.xml Wed Jun 01 10:43:23 2016 -0400 @@ -33,8 +33,8 @@ <tests> <test> - <param name="input_file" value="metaphlan2_profiled_metagenome.txt"/> - <output name="krona" file="metaphlan2krona_output_file.txt"/> + <param name="input_file" value="community_profile.tabular"/> + <output name="krona" file="formatted_to_krona.tabular"/> </test> </tests> @@ -42,10 +42,7 @@ **What it does** -MetaPhlAn is a computational tool for profiling the composition of microbial -communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun -sequencing data with species level resolution. For more information, check the -`user manual <https://bitbucket.org/biobakery/metaphlan2/>`_. +MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data with species level resolution. For more information, check the `user manual <https://bitbucket.org/biobakery/metaphlan2/>`_. This tool format MetaPhlAn2 output for Krona.