diff README.rst @ 0:abe72aa5a8b9 draft

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty

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+Galaxy wrappers for HUMAnN2
+===========================
+
+Galaxy should be able to automatically install the dependencies, i.e. the
+HUMAnN2 binaries and its dependencies.
+
+After installation, you must tell Galaxy about the defaut database with
+clade-specific marker genes used for taxonomic profiling (MetaPhlAn2), and where
+to find it:
+
+* Put the ``metaphlan2_db.loc`` file in the ``tool-data/`` folder, after uncommenting last line
+* Download whole MetaPhlan2 source code: https://bitbucket.org/biobakery/metaphlan2/get/2.5.0.zip
+* Unzip it
+* Move ``db_v20`` folder into ``dependency_dir/metaphlan2/2.5.0/bebatut/package_metaphlan2_2_5_0/...`` folder