Mercurial > repos > bebatut > humann2
view test-data/humann2_sam_pathabundance.tsv @ 3:ddc59d42d17c draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit e5b8f29dde45dddcda6ee283212dd1bdde487f87-dirty
| author | bebatut |
|---|---|
| date | Fri, 18 Dec 2015 04:28:22 -0500 |
| parents | 947012405a6e |
| children |
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# Pathway humann2_Abundance PWY-7208: superpathway of pyrimidine nucleobases salvage 3.1634460239 PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron 2.4482393111 PWY-3841: folate transformations II 2.9270446651 PWY-7221: guanosine ribonucleotides de novo biosynthesis 2.5901918184 PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.2068085186 1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis 2.4612648808 PWY-5100: pyruvate fermentation to acetate and lactate II 2.4191007832 PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris 1.6860746138 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I 2.0882763520 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.5309785395 PWY-5505: L-glutamate and L-glutamine biosynthesis 2.0179030384 PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.8604040064 HSERMETANA-PWY: L-methionine biosynthesis III 1.9821605550 HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.1318619128 HOMOSER-METSYN-PWY: L-methionine biosynthesis I 1.7513134851 HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.3149243918 DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I 1.7397022780 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I 1.6836788383 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.0124019236 PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation 1.6117113393 PWY66-422: D-galactose degradation V (Leloir pathway) 1.6096242991 PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris 1.1023839052 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I 1.5775328499 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8478734825 PWY-7242: D-fructuronate degradation 1.5273004964 PWY-5030: L-histidine degradation III 1.4962071452 VALSYN-PWY: L-valine biosynthesis 1.4019863838 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8652390223 GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation 1.3972479991 CALVIN-PWY: Calvin-Benson-Bassham cycle 1.3078911428 PWY-5659: GDP-mannose biosynthesis 1.2407272550 PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8912655971 RHAMCAT-PWY: L-rhamnose degradation I 1.1337868481 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis 1.1294704465 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.9865581453 GALACTUROCAT-PWY: D-galacturonate degradation I 1.1181930001 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II 1.1098779134 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5892751915 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4387889425 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II 1.1098779134 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5892751915 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4387889425 PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II 1.0399014143 PWY-3781: aerobic respiration I (cytochrome c) 0.8865248227