Mercurial > repos > bebatut > humann2
view test-data/humann2_sam_pathcoverage.tsv @ 9:7d2be77d5b83 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit 11b919f18ba85a40ff0ff4df82aac9be6da188c5-dirty
| author | bebatut |
|---|---|
| date | Thu, 31 Mar 2016 03:35:17 -0400 |
| parents | 947012405a6e |
| children |
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# Pathway humann2_Coverage PWY-7208: superpathway of pyrimidine nucleobases salvage 0.8326116675 PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.7887151367 PWY-3841: folate transformations II 0.7981953577 PWY-7221: guanosine ribonucleotides de novo biosynthesis 0.7732485560 PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5731619001 1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis 0.7495073164 PWY-5100: pyruvate fermentation to acetate and lactate II 0.7410248669 PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris 0.7881393909 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I 0.6941671038 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.6450407623 PWY-5505: L-glutamate and L-glutamine biosynthesis 0.6903428673 PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.7047445298 HSERMETANA-PWY: L-methionine biosynthesis III 0.6861852057 HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5522121285 HOMOSER-METSYN-PWY: L-methionine biosynthesis I 0.6441336419 HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5982506088 DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I 0.6416934147 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I 0.6270534008 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5174177685 PWY66-422: D-galactose degradation V (Leloir pathway) 0.6162679643 PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris 0.6850888598 PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation 0.6138469918 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I 0.6077002683 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4750575774 PWY-7242: D-fructuronate degradation 0.5964915791 PWY-5030: L-histidine degradation III 0.5883052819 VALSYN-PWY: L-valine biosynthesis 0.5688165005 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4748410191 GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation 0.5677917487 CALVIN-PWY: Calvin-Benson-Bassham cycle 0.5485251397 PWY-5659: GDP-mannose biosynthesis 0.5282770203 PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4801917076 RHAMCAT-PWY: L-rhamnose degradation I 0.5016200440 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis 0.5008438557 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5109686863 GALACTUROCAT-PWY: D-galacturonate degradation I 0.4965486979 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II 0.4941295971 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4619040484 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.3767488276 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II 0.4941295971 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4619040484 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.3767488276 PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II 0.4768751535 PWY-3781: aerobic respiration I (cytochrome c) 0.4275710623