Mercurial > repos > bebatut > humann2
diff test-data/humann2_sam_pathcoverage.tsv @ 0:947012405a6e draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit dd6f3fda4d992efa4a91ee0823ecc3af8a9532d3-dirty
| author | bebatut |
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| date | Thu, 17 Dec 2015 08:58:05 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/humann2_sam_pathcoverage.tsv Thu Dec 17 08:58:05 2015 -0500 @@ -0,0 +1,45 @@ +# Pathway humann2_Coverage +PWY-7208: superpathway of pyrimidine nucleobases salvage 0.8326116675 +PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.7887151367 +PWY-3841: folate transformations II 0.7981953577 +PWY-7221: guanosine ribonucleotides de novo biosynthesis 0.7732485560 +PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5731619001 +1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis 0.7495073164 +PWY-5100: pyruvate fermentation to acetate and lactate II 0.7410248669 +PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris 0.7881393909 +PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I 0.6941671038 +PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.6450407623 +PWY-5505: L-glutamate and L-glutamine biosynthesis 0.6903428673 +PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.7047445298 +HSERMETANA-PWY: L-methionine biosynthesis III 0.6861852057 +HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5522121285 +HOMOSER-METSYN-PWY: L-methionine biosynthesis I 0.6441336419 +HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5982506088 +DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I 0.6416934147 +SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I 0.6270534008 +SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5174177685 +PWY66-422: D-galactose degradation V (Leloir pathway) 0.6162679643 +PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris 0.6850888598 +PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation 0.6138469918 +PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I 0.6077002683 +PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4750575774 +PWY-7242: D-fructuronate degradation 0.5964915791 +PWY-5030: L-histidine degradation III 0.5883052819 +VALSYN-PWY: L-valine biosynthesis 0.5688165005 +VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4748410191 +GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation 0.5677917487 +CALVIN-PWY: Calvin-Benson-Bassham cycle 0.5485251397 +PWY-5659: GDP-mannose biosynthesis 0.5282770203 +PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.4801917076 +RHAMCAT-PWY: L-rhamnose degradation I 0.5016200440 +ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis 0.5008438557 +ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5109686863 +GALACTUROCAT-PWY: D-galacturonate degradation I 0.4965486979 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II 0.4941295971 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4619040484 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.3767488276 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II 0.4941295971 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4619040484 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.3767488276 +PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II 0.4768751535 +PWY-3781: aerobic respiration I (cytochrome c) 0.4275710623 \ No newline at end of file