Mercurial > repos > bebatut > humann2
diff test-data/humann2_sam_pathabundance.tsv @ 0:947012405a6e draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit dd6f3fda4d992efa4a91ee0823ecc3af8a9532d3-dirty
| author | bebatut |
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| date | Thu, 17 Dec 2015 08:58:05 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/humann2_sam_pathabundance.tsv Thu Dec 17 08:58:05 2015 -0500 @@ -0,0 +1,45 @@ +# Pathway humann2_Abundance +PWY-7208: superpathway of pyrimidine nucleobases salvage 3.1634460239 +PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron 2.4482393111 +PWY-3841: folate transformations II 2.9270446651 +PWY-7221: guanosine ribonucleotides de novo biosynthesis 2.5901918184 +PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.2068085186 +1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis 2.4612648808 +PWY-5100: pyruvate fermentation to acetate and lactate II 2.4191007832 +PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris 1.6860746138 +PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I 2.0882763520 +PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.5309785395 +PWY-5505: L-glutamate and L-glutamine biosynthesis 2.0179030384 +PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.8604040064 +HSERMETANA-PWY: L-methionine biosynthesis III 1.9821605550 +HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.1318619128 +HOMOSER-METSYN-PWY: L-methionine biosynthesis I 1.7513134851 +HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.3149243918 +DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I 1.7397022780 +SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I 1.6836788383 +SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 1.0124019236 +PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation 1.6117113393 +PWY66-422: D-galactose degradation V (Leloir pathway) 1.6096242991 +PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris 1.1023839052 +PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I 1.5775328499 +PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8478734825 +PWY-7242: D-fructuronate degradation 1.5273004964 +PWY-5030: L-histidine degradation III 1.4962071452 +VALSYN-PWY: L-valine biosynthesis 1.4019863838 +VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8652390223 +GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation 1.3972479991 +CALVIN-PWY: Calvin-Benson-Bassham cycle 1.3078911428 +PWY-5659: GDP-mannose biosynthesis 1.2407272550 +PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.8912655971 +RHAMCAT-PWY: L-rhamnose degradation I 1.1337868481 +ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis 1.1294704465 +ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.9865581453 +GALACTUROCAT-PWY: D-galacturonate degradation I 1.1181930001 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II 1.1098779134 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5892751915 +PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4387889425 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II 1.1098779134 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5892751915 +PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0.4387889425 +PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II 1.0399014143 +PWY-3781: aerobic respiration I (cytochrome c) 0.8865248227 \ No newline at end of file